Welcome to OmicIDX

For the impatient...

This section gives just enough information to get off to a quick start using OmicIDX.

Bigquery Data Warehouse

Use SQL Google Cloud Bigquery to search and analyze preloaded omics metadata and integrate with external datasets.

The OmicIDX Web API

Use the open OmicIDX web API to query and analyze omics metadata.

Coding examples

Follow worked examples or run Jupyter notebook workflows.

Contribution Guidelines

How to contribute to OmicIDX

Developer documentation